STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3CKU4CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. (592 aa)    
Predicted Functional Partners:
A0A0D3A3E9
Thioredoxin domain-containing protein.
     
  0.900
A0A0D3E4K2
Uncharacterized protein.
  
 
 0.898
A0A0D3A5S1
Nucleoside diphosphate kinase.
  
 
 0.848
A0A0D3AT44
Nucleoside diphosphate kinase.
  
 
 0.848
A0A0D3BFH1
Nucleoside diphosphate kinase.
  
 
 0.848
A0A0D3BNB0
Nucleoside diphosphate kinase.
  
 
 0.848
A0A0D3E209
Nucleoside diphosphate kinase.
  
 
 0.848
A0A0D3E746
Nucleoside diphosphate kinase.
  
 
 0.848
A0A0D3DBR5
Uncharacterized protein.
   
 
 0.808
A0A0D3A261
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.800
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.