STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3CL79Uncharacterized protein. (500 aa)    
Predicted Functional Partners:
A0A0D3ARE8
DUF4057 domain-containing protein.
      
 0.557
A0A0D3DCQ6
LRRNT_2 domain-containing protein.
  
 
  0.535
A0A0D3D5Y0
Uncharacterized protein.
  
 
  0.534
A0A0D3E6Q3
WD_REPEATS_REGION domain-containing protein.
  
 
   0.530
A0A0D3CK36
Uncharacterized protein.
  
 
  0.522
A0A0D3B024
LRRNT_2 domain-containing protein.
  
 
  0.519
A0A0D3CZJ1
Malectin domain-containing protein.
  
 
  0.519
A0A0D3BJ95
Uncharacterized protein.
      
 0.514
A0A0D3E9P3
Uncharacterized protein.
     
 0.514
A0A0D3DXU6
Uncharacterized protein.
  
 
  0.511
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.