Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3CLM2Uncharacterized protein. (764 aa)    
Predicted Functional Partners:
A0A0D3AJF9
Uncharacterized protein.
      
 0.571
A0A0D3AQ87
Uncharacterized protein.
     
 0.486
A0A0D3CWZ7
Uncharacterized protein.
     
 0.486
A0A0D3D097
Uncharacterized protein.
     
 0.486
A0A0D3DIY3
Uncharacterized protein.
     
 0.486
A0A0D3DQ84
Uncharacterized protein.
  
   
 0.485
A0A0D3DWM8
Uncharacterized protein.
  
   
 0.467
A0A0D3CMF7
Uncharacterized protein.
  
     0.459
A0A0D3EE28
Uncharacterized protein.
  
     0.456
A0A0D3AFD6
Uncharacterized protein.
  
     0.452
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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