Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3CP64Uncharacterized protein. (192 aa)    
Predicted Functional Partners:
A0A0D3BJ48
Uncharacterized protein.
    
 0.986
A0A0D3D5S8
Uncharacterized protein.
    
 0.986
A0A0D3E856
CID domain-containing protein.
   
 0.985
A0A0D3CYE7
C2H2-type domain-containing protein.
   
 0.962
A0A0D3C4L5
Uncharacterized protein.
   
 0.956
A0A0D3BA07
Fip1 domain-containing protein.
    
 0.955
A0A0D3DQ30
TPR_REGION domain-containing protein.
    
 0.945
A0A0D3ED16
Uncharacterized protein.
    
 0.945
A0A0D3DD89
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.931
A0A0D3AMX0
CPSF_A domain-containing protein.
   
 0.920
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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