STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3CQA4RanBD1 domain-containing protein. (438 aa)    
Predicted Functional Partners:
A0A0D3BIB8
Nup54 domain-containing protein.
   
 0.953
A0A0D3D6M9
Uncharacterized protein.
   
 0.928
A0A0D3EB90
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.928
A0A0D3D8J5
Uncharacterized protein.
   
 0.925
A0A0D3C5N6
Nuclear pore protein.
   
 0.907
A0A0D3DTX1
Nuclear pore protein.
   
 0.907
A0A0D3EHK6
Uncharacterized protein.
    
 0.902
A0A0D3E4A4
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.901
A0A0D3CAA2
Uncharacterized protein.
   
 0.900
A0A0D3DX98
Uncharacterized protein.
   
 0.900
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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