Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3CT22Uncharacterized protein. (649 aa)    
Predicted Functional Partners:
A0A0D3C963
Uncharacterized protein.
     
 0.778
A0A0D2ZUG2
HMA domain-containing protein.
      
 0.693
A0A0D3BSU8
Uncharacterized protein.
      
 0.677
A0A0D3D0L8
Uncharacterized protein.
    
 0.662
A0A0D3CZW8
Choline_kin_N domain-containing protein.
    
 0.612
A0A0D3E8S5
Uncharacterized protein.
    
 0.612
A0A0D3AWQ8
Aa_trans domain-containing protein.
    
 0.588
A0A0D3DBL7
Aa_trans domain-containing protein.
    
 0.588
A0A0D3E0Q1
Aa_trans domain-containing protein.
    
 0.588
A0A0D3BUI4
Uncharacterized protein.
    
 0.529
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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