STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3CU94AAA_16 domain-containing protein. (528 aa)    
Predicted Functional Partners:
A0A0D3BR67
Uncharacterized protein.
   
 0.996
A0A0D3DR85
Uncharacterized protein.
   
 0.994
A0A0D3EEZ4
ORC_WH_C domain-containing protein.
   
 0.994
A0A0D3E8D0
Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.
   
 0.991
A0A0D3AUJ0
DNA helicase; Belongs to the MCM family.
   
 0.990
A0A0D3AV27
ORC4_C domain-containing protein.
   
 0.990
A0A0D3D9F9
DNA helicase; Belongs to the MCM family.
   
 0.990
A0A0D3D9Z6
Origin of replication complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family.
   
 0.990
A0A0D3BDZ0
DNA helicase; Belongs to the MCM family.
   
 0.988
A0A0D2ZS88
MCM domain-containing protein; Belongs to the MCM family.
   
 0.986
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.