STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3CV75NTP_transf_2 domain-containing protein. (1307 aa)    
Predicted Functional Partners:
A0A0D3BV24
DSHCT domain-containing protein.
   
 
 0.650
A0A0D3CLM8
Uncharacterized protein.
   
 
 0.650
A0A0D3E5F9
Uncharacterized protein.
   
 
 0.650
A0A0D3AC04
Uncharacterized protein.
    
   0.530
A0A0D3B0W0
Uncharacterized protein.
    
   0.530
A0A0D3BSU1
Uncharacterized protein.
    
   0.530
A0A0D3CHX0
Uncharacterized protein.
    
   0.530
A0A0D3EFW8
Uncharacterized protein.
    
   0.530
A0A0D3C6F8
Uncharacterized protein.
      
 0.523
A0A0D3DXK6
RRM domain-containing protein.
    
 
 0.513
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.