STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3CYK6Uncharacterized protein. (2197 aa)    
Predicted Functional Partners:
A0A0D3AA95
Uncharacterized protein.
   
 
 0.782
A0A0D3AA96
Adaptin_N domain-containing protein.
   
 
 0.782
A0A0D3CCU1
AP-1 complex subunit gamma.
   
 
 0.782
A0A0D3CD64
AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.
   
 
 0.782
A0A0D3CF78
AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.
   
 
 0.782
A0A0D3D702
AP-1 complex subunit gamma.
   
 
 0.782
A0A0D3D716
GAE domain-containing protein.
   
 
 0.782
A0A0D3DR41
Adaptin_N domain-containing protein.
   
 
 0.782
A0A0D3CMZ7
Uncharacterized protein; Belongs to the CTL (choline transporter-like) family.
      
 0.597
A0A0D3CYR5
Uncharacterized protein.
      
 0.586
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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