STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3D0N6F-box domain-containing protein. (419 aa)    
Predicted Functional Partners:
A0A0D3CPS2
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
      
 0.483
A0A0D3EFK4
TLC domain-containing protein.
  
     0.473
A0A0D3B6N2
Uncharacterized protein.
  
     0.469
A0A0D3DAX4
TLC domain-containing protein.
  
     0.468
A0A0D3B105
WD_REPEATS_REGION domain-containing protein.
      
 0.456
A0A0D3CV19
Uncharacterized protein.
  
     0.453
A0A0D3DUQ5
Uncharacterized protein.
  
     0.452
A0A0D3AW59
TLC domain-containing protein.
  
     0.448
A0A0D3B6N3
WHy domain-containing protein.
  
     0.446
A0A0D3EDW1
Uncharacterized protein.
  
     0.443
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.