STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3D1Q9Uncharacterized protein. (138 aa)    
Predicted Functional Partners:
A0A0D3EFU7
LITAF domain-containing protein.
  
     0.483
A0A0D3AIT0
LITAF domain-containing protein.
  
     0.474
A0A0D3AKB7
Uncharacterized protein.
  
     0.455
A0A0D3AID8
Uncharacterized protein.
  
     0.450
A0A0D3EDJ3
Uncharacterized protein.
  
     0.449
A0A0D3CSD5
Uncharacterized protein.
  
     0.444
A0A0D3AQW5
Uncharacterized protein.
  
     0.441
A0A0D3E0G7
Uncharacterized protein.
  
     0.436
A0A0D3BEW0
Uncharacterized protein.
  
     0.431
A0A0D3D3B4
Uncharacterized protein.
  
     0.431
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.