STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3D7T6Uncharacterized protein. (147 aa)    
Predicted Functional Partners:
A0A0D3C3H7
Uncharacterized protein.
  
   
 0.604
A0A0D2ZWR4
Uncharacterized protein.
      
 0.569
A0A0D3AMF0
Uncharacterized protein.
  
   
 0.546
A0A0D3DD52
Uncharacterized protein.
  
     0.522
A0A0D3CMH9
Uncharacterized protein.
  
     0.510
A0A0D3BSS8
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric E1 enzyme. E1 activates RUB1/NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a RUB1-ECR1 thioester and free AMP. E1 finally transfers RUB1 to the catalytic cysteine of RCE1. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily.
      
 0.508
A0A0D3A744
Uncharacterized protein.
  
     0.503
A0A0D3DBP8
Uncharacterized protein.
      
 0.502
A0A0D3DGH1
Uncharacterized protein.
  
     0.502
A0A0D3BC78
Uncharacterized protein.
  
     0.500
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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