STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3D8T3Uncharacterized protein. (139 aa)    
Predicted Functional Partners:
A0A0D3B1M4
Uncharacterized protein.
  
    0.549
A0A0D3B1M6
Uncharacterized protein.
  
    0.547
A0A0D3EET4
Uncharacterized protein.
  
    0.540
A0A0D3DUE0
Uncharacterized protein.
  
     0.538
A0A0D3CN28
Uncharacterized protein.
  
    0.536
A0A0D3A875
Uncharacterized protein.
  
     0.532
A0A0D3E2Q1
Uncharacterized protein.
  
     0.529
A0A0D3A0A4
Uncharacterized protein.
  
     0.527
A0A0D3A0C9
Uncharacterized protein.
  
     0.527
A0A0D3A0P7
Uncharacterized protein.
  
     0.526
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.