STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3D9U0Uncharacterized protein. (256 aa)    
Predicted Functional Partners:
A0A0D2ZRY1
Uncharacterized protein.
  
 
   0.534
A0A0D3E8J5
Uncharacterized protein.
  
     0.524
A0A0D3DZJ1
Uncharacterized protein.
  
     0.519
A0A0D3BJE7
Uncharacterized protein.
  
     0.518
A0A0D3ANW0
Uncharacterized protein.
  
     0.515
A0A0D3CSA9
Uncharacterized protein.
  
     0.512
A0A0D3A0S2
Uncharacterized protein.
  
     0.511
A0A0D3C400
Uncharacterized protein.
  
     0.511
A0A0D3BYT7
Uncharacterized protein.
  
     0.510
A0A0D3C8Z3
LOB domain-containing protein.
  
     0.510
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.