STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3DB12Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (253 aa)    
Predicted Functional Partners:
A0A0D3E6Q3
WD_REPEATS_REGION domain-containing protein.
      
 0.533
A0A0D3BFX0
Uncharacterized protein.
   
  
 0.516
A0A0D3AER4
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.512
A0A0D3CLG6
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.512
A0A0D3D209
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.512
A0A0D3AK54
S-acyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.482
A0A0D3B234
S-acyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.482
A0A0D3EDT7
S-acyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.482
A0A0D3E5J6
Uncharacterized protein.
   
  
 0.472
A0A0D3ASL5
Uncharacterized protein.
      
 0.470
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.