STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3DE46Uncharacterized protein. (340 aa)    
Predicted Functional Partners:
A0A0D3CZ64
PfkB domain-containing protein.
   
  
 0.599
A0A0D3DNC1
Uncharacterized protein.
      
 0.563
A0A0D3BDN9
Uncharacterized protein.
   
  
 0.549
A0A0D3CY89
Uncharacterized protein.
  
     0.532
A0A0D3DPL0
Uncharacterized protein.
  
     0.530
A0A0D3E2C5
Uncharacterized protein.
  
     0.530
A0A0D3DBS2
Uncharacterized protein.
      
 0.529
A0A0D3E0U5
Uncharacterized protein.
      
 0.529
A0A0D3EEH4
Uncharacterized protein.
  
     0.527
A0A0D3AN95
Uncharacterized protein.
  
     0.526
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.