STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3DKN5AP2/ERF domain-containing protein. (171 aa)    
Predicted Functional Partners:
A0A0D3DJ65
PsbP domain-containing protein.
  
 
   0.558
A0A0D3DYQ1
PsbP domain-containing protein.
  
 
   0.557
A0A0D3B2H2
Dof-type domain-containing protein.
  
 
  0.531
A0A0D3CDG4
Dof-type domain-containing protein.
  
 
  0.531
A0A0D3ED05
Dof-type domain-containing protein.
  
 
  0.531
A0A0D3AKT0
Dof-type domain-containing protein.
  
 
  0.526
A0A0D2ZUL0
Dof-type domain-containing protein.
  
     0.523
A0A0D3BKT3
Dof-type domain-containing protein.
  
     0.522
A0A0D3CV98
Dof-type domain-containing protein.
  
     0.521
A0A0D3DE60
Dof-type domain-containing protein.
  
     0.521
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.