STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3DMM7Uncharacterized protein. (154 aa)    
Predicted Functional Partners:
A0A0D3C2K0
Uncharacterized protein.
  
 
 0.704
A0A0D3CNY1
Sec3-PIP2_bind domain-containing protein.
    
 0.662
A0A0D2ZR87
Uncharacterized protein.
  
  
  0.571
A0A0D3DGK7
Phytocyanin domain-containing protein.
  
   
 0.570
A0A0D3DZ82
Uncharacterized protein.
  
 
 0.567
A0A0D3CXS6
Uncharacterized protein.
  
 
  0.559
A0A0D3ACA8
Uncharacterized protein.
  
  0.551
A0A0D3BD39
Methyltransferase.
  
  
  0.551
A0A0D3B2J2
Uncharacterized protein.
  
  0.548
A0A0D3DSW1
GUB_WAK_bind domain-containing protein.
  
 
  0.548
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.