Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
A0A0D3DP83LRRNT_2 domain-containing protein. (819 aa)    
Predicted Functional Partners:
A0A0D3B5T4
Uncharacterized protein.
    
 0.711
A0A0D3B152
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.532
A0A0D3DMQ0
Uncharacterized protein.
  
  0.500
A0A0D3C201
Uncharacterized protein.
  
 
   0.497
A0A0D3CEB9
Uncharacterized protein.
  
 
   0.488
A0A0D3B8M3
Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family.
      
 0.486
A0A0D3C4C5
LRRNT_2 domain-containing protein.
  
   0.486
A0A0D3CQF6
Uncharacterized protein.
  
  0.484
A0A0D3BKV8
Uncharacterized protein.
  
     0.483
A0A0D3DA69
Uncharacterized protein.
  
 
   0.477
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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