Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A0D3DQL9Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (377 aa)    
Predicted Functional Partners:
A0A0D3A4C4
Uncharacterized protein.
      
 0.647
A0A0D3CK24
DOG1 domain-containing protein.
      
 0.630
A0A0D3BUN9
LysM domain-containing protein.
   
  
 0.556
A0A0D3A2W8
Uncharacterized protein.
      
 0.543
A0A0D3DH58
Uncharacterized protein.
      
 0.543
A0A0D3CBU7
Bromo domain-containing protein.
     
 0.524
A0A0D3D7S7
Bromo domain-containing protein.
     
 0.524
A0A0D3DQM0
Uncharacterized protein.
     
 0.524
A0A0D3DF48
Uncharacterized protein.
      
 0.473
A0A0D3D1U5
Uncharacterized protein; Belongs to the aldehyde dehydrogenase family.
      
 0.463
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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