STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3DSX6Phytocyanin domain-containing protein. (277 aa)    
Predicted Functional Partners:
A0A0D3B5T4
Uncharacterized protein.
    
 0.562
A0A0D3CCX0
Uncharacterized protein.
  
 
  0.545
A0A0D3ANL1
ANK_REP_REGION domain-containing protein.
  
 
  0.542
A0A0D3ALA6
RRM domain-containing protein.
  
 
  0.538
A0A0D3A0P0
NYN domain-containing protein.
  
 
  0.536
A0A0D3CWZ9
F-box domain-containing protein.
  
  
  0.533
A0A0D3B057
Uncharacterized protein.
  
     0.529
A0A0D3CQ00
B30.2/SPRY domain-containing protein.
    
 0.527
A0A0D3DLG9
Uncharacterized protein.
  
 
   0.522
A0A0D3C0H3
DDA1 domain-containing protein.
  
 
  0.517
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.