STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3DV63Uncharacterized protein. (371 aa)    
Predicted Functional Partners:
A0A0D3BYW1
HMG box domain-containing protein.
    
 
 0.578
A0A0D3C7M8
Uncharacterized protein.
    
 
 0.578
A0A0D3CKM2
Uncharacterized protein.
    
 
 0.578
A0A0D3CKM3
Uncharacterized protein.
    
 
 0.578
A0A0D3CR31
Uncharacterized protein.
    
 
 0.578
A0A0D3D119
Uncharacterized protein.
    
 
 0.578
A0A0D3DIX3
Uncharacterized protein.
    
 
 0.578
A0A0D3DYZ1
Uncharacterized protein.
    
 
 0.578
A0A0D3A2S9
Uncharacterized protein.
    
  0.506
A0A0D3AIH3
Ubiquitinyl hydrolase 1.
    
 0.451
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
Server load: low (22%) [HD]