STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3DWD0Uncharacterized protein. (186 aa)    
Predicted Functional Partners:
A0A0D3CB62
Uncharacterized protein.
  
 
 0.831
A0A0D3A610
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.770
A0A0D3DFX0
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.770
A0A0D3E622
Uncharacterized protein.
  
 0.770
A0A0D3E624
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.770
A0A0D3CMR1
Uncharacterized protein.
  
 
 0.670
A0A0D3D0I8
Uncharacterized protein.
  
 
 0.642
A0A0D3E4K2
Uncharacterized protein.
   
  
 0.620
A0A0D3AMC7
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily.
     
 0.614
A0A0D3EAU2
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily.
     
 0.614
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.