STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3DWH6BES1_N domain-containing protein. (322 aa)    
Predicted Functional Partners:
A0A0D3A465
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.846
A0A0D3BKC5
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.846
A0A0D3DEX4
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.846
A0A0D3EHY9
Uncharacterized protein.
    
 
 0.576
A0A0D3AFM0
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 
 0.547
A0A0D3ATH1
Uncharacterized protein.
      
 0.541
A0A0D3C4W9
Steroid 5-alpha-reductase DET2; Involved in a reduction step in the biosynthesis of the plant steroid, brassinolide.
      
 0.530
A0A0D3CAK4
Uncharacterized protein.
    
 
 0.529
A0A0D3DX41
Uncharacterized protein.
    
 
 0.529
A0A0D3A616
Uncharacterized protein.
      
 0.528
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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