STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3DXG0Uncharacterized protein. (230 aa)    
Predicted Functional Partners:
A0A0D3B9M1
Diphthami_syn_2 domain-containing protein.
  
 
 0.840
A0A0D3CMT6
Diphthami_syn_2 domain-containing protein.
  
 
 0.840
A0A0D3BFX4
2-(3-amino-3-carboxypropyl)histidine synthase subunit 1; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2.
   
 0.793
A0A0D3DUD9
2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2.
   
 0.793
A0A0D2ZU99
Tr-type G domain-containing protein.
    
 0.715
A0A0D2ZZ17
Tr-type G domain-containing protein.
    
 0.715
A0A0D2ZZ72
EFG_C domain-containing protein.
    
 0.715
A0A0D3AXG7
Tr-type G domain-containing protein.
    
 0.715
A0A0D3AXH2
Tr-type G domain-containing protein.
    
 0.715
A0A0D3BJ30
Tr-type G domain-containing protein.
    
 0.715
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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