STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3E039Uncharacterized protein; Belongs to the TrpA family. (276 aa)    
Predicted Functional Partners:
A0A0D3BDB6
IGPS domain-containing protein.
 
 
 0.998
A0A0D3C9C1
Tryptophan synthase.
 
 0.998
A0A0D3D2S9
Tryptophan synthase.
 
 0.998
A0A0D3DBQ8
IGPS domain-containing protein.
 
 
 0.998
A0A0D3DGC6
Tryptophan synthase.
 
 0.998
A0A0D3EB54
Tryptophan synthase.
 
 0.998
A0A0D3BZN2
PALP domain-containing protein.
  
 0.996
A0A0D3C0R0
PALP domain-containing protein.
  
 0.996
A0A0D3DP47
Uncharacterized protein.
  
 0.996
A0A0D3AJM9
Uncharacterized protein.
 
 
 0.983
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.