STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3EAE2Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (303 aa)    
Predicted Functional Partners:
A0A0D3CLI1
Uncharacterized protein.
   
 
 0.955
A0A0D3CTJ4
Uncharacterized protein; Belongs to the cytochrome P450 family.
     
 0.954
A0A0D3C8J0
VDE domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
     
 0.951
A0A0D3D896
FHA domain-containing protein.
     
 0.949
A0A0D3E2J4
Zeaxanthin epoxidase, chloroplastic; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin.
     
 0.949
A0A0D3DZ68
DUF4033 domain-containing protein.
     
 0.926
A0A0D3BMT9
Uncharacterized protein.
   
  
 0.572
A0A0D3CMR2
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
      
 0.563
A0A0D3DYP6
Amino_oxidase domain-containing protein.
      
 0.563
A0A0D3AHY0
Uncharacterized protein.
  
   
 0.562
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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