STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3EEN2Uncharacterized protein. (239 aa)    
Predicted Functional Partners:
A0A0D3DJR3
Uncharacterized protein.
      
 0.529
A0A0D3B3N0
Uncharacterized protein.
  
     0.513
A0A0D3DGA0
Uncharacterized protein.
  
     0.512
A0A0D3B3N1
Uncharacterized protein.
  
     0.508
A0A0D3AT58
Uncharacterized protein.
  
     0.495
A0A0D3E0F7
Uncharacterized protein.
      
 0.487
A0A0D3C0W8
Uncharacterized protein.
      
 0.483
A0A0D3DD41
Uncharacterized protein.
      
 0.456
A0A0D2ZQP9
Uncharacterized protein.
      
 0.426
A0A0D3CY92
Uncharacterized protein.
      
 0.426
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.