STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3EFI8Uncharacterized protein. (315 aa)    
Predicted Functional Partners:
A0A0D3DBR9
Uncharacterized protein.
      
 0.487
A0A0D3BY34
Uncharacterized protein.
      
 0.485
A0A0D3CHV9
Uncharacterized protein.
   
 0.481
A0A0D3D251
Metaxin; Involved in transport of proteins into the mitochondrion. Belongs to the metaxin family.
    
 
 0.478
A0A0D3E3F7
Metaxin; Involved in transport of proteins into the mitochondrion. Belongs to the metaxin family.
    
 
 0.478
A0A0D3DXQ4
Uncharacterized protein.
      
 0.477
A0A0D3BAN6
Uncharacterized protein.
    
 
 0.405
A0A0D3CLA1
Uncharacterized protein.
    
 
 0.405
A0A0D3EHL2
Uncharacterized protein.
    
 
 0.405
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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