STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3EGF3Uncharacterized protein. (588 aa)    
Predicted Functional Partners:
A0A0D3BW41
Uncharacterized protein.
    
 0.883
A0A0D3E399
MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.569
A0A0D3CZY7
Uncharacterized protein.
   
 0.515
A0A0D3E1N3
Dof-type domain-containing protein.
  
   
 0.467
A0A0D3DB34
TF-B3 domain-containing protein.
  
   
 0.454
A0A0D3AY31
Dof-type domain-containing protein.
  
   
 0.452
A0A0D2ZPG5
TF-B3 domain-containing protein.
  
   
 0.449
A0A0D3AY86
Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family.
      
 0.444
A0A0D3BFZ2
Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family.
      
 0.444
A0A0D3DDF4
Dof-type domain-containing protein.
  
   
 0.444
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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