STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3EGU7PMEI domain-containing protein. (199 aa)    
Predicted Functional Partners:
A0A0D3BHH5
Malectin_like domain-containing protein.
  
 
 0.577
A0A0D3BHH6
Malectin_like domain-containing protein.
  
 
 0.536
A0A0D3CBS9
Uncharacterized protein.
  
 
  0.526
A0A0D3E9Y5
PMEI domain-containing protein.
      
 0.524
A0A0D3B9H1
Uncharacterized protein.
  
 
  0.522
A0A0D3B5E6
C2H2-type domain-containing protein.
  
 
  0.519
A0A0D3CH48
AAI domain-containing protein; Belongs to the plant LTP family.
  
 
  0.517
A0A0D3CUG8
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.515
A0A0D3B6T5
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.511
A0A0D3BWM0
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.505
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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