STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0L32_010134Succinate-semialdehyde dehydrogenase. (500 aa)    
Predicted Functional Partners:
E0L32_000790
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.831
E0L32_007430
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.828
E0L32_010511
Tryptophan synthase.
    
 0.810
E0L32_008065
Citrate synthase; Belongs to the citrate synthase family.
  
 0.776
E0L32_012102
Citrate synthase; Belongs to the citrate synthase family.
  
 0.776
E0L32_000668
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 0.738
E0L32_008850
Uncharacterized protein.
  
 0.737
E0L32_008851
CoA_binding domain-containing protein.
  
 0.737
E0L32_005601
Uncharacterized protein.
    
 0.736
E0L32_010293
Uncharacterized protein; Belongs to the LDH/MDH superfamily.
   
 0.724
Your Current Organism:
Phialemoniopsis curvata
NCBI taxonomy Id: 1093900
Other names: Bionectriaceae sp. NRRL 46124, CBS 490.82, CDC 45-394-63, P. curvata, Phialemoniopsis curvata (W. Gams & W. B. Cooke) H. Perdomo, D. Garca, Gen, Cano & Guarro 2013, Phialemonium curvatum, Xylariales sp. HP-2011b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.