STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0L32_009550SRP9-21 domain-containing protein. (174 aa)    
Predicted Functional Partners:
E0L32_009208
Uncharacterized protein.
   
 0.999
E0L32_010530
C3H1-type domain-containing protein.
   
 0.998
E0L32_008943
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 0.997
E0L32_004692
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
    
 0.996
E0L32_005617
SRP54 domain-containing protein.
   
 0.915
E0L32_005202
Uncharacterized protein.
    
 
 0.915
E0L32_012346
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
   0.890
E0L32_008792
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 
 0.889
E0L32_008188
Ribosomal_L23eN domain-containing protein.
    
 
 0.889
E0L32_010936
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
    
   0.886
Your Current Organism:
Phialemoniopsis curvata
NCBI taxonomy Id: 1093900
Other names: Bionectriaceae sp. NRRL 46124, CBS 490.82, CDC 45-394-63, P. curvata, Phialemoniopsis curvata (W. Gams & W. B. Cooke) H. Perdomo, D. Garca, Gen, Cano & Guarro 2013, Phialemonium curvatum, Xylariales sp. HP-2011b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.