STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0L32_012187AMPK1_CBM domain-containing protein. (538 aa)    
Predicted Functional Partners:
E0L32_010931
Uncharacterized protein.
    
 0.602
E0L32_008062
SMN domain-containing protein.
    
 0.584
E0L32_011070
ERCC4 domain-containing protein.
    
 0.563
E0L32_000383
Small nuclear ribonucleoprotein G.
    
  0.524
E0L32_001798
WD_REPEATS_REGION domain-containing protein.
    
  0.500
E0L32_007924
DNA polymerase.
    
  0.495
E0L32_001776
DNA polymerase.
    
  0.495
E0L32_005597
ERCC4 domain-containing protein.
    
 0.485
E0L32_001928
Small nuclear ribonucleoprotein Sm D2.
    
  0.470
E0L32_001751
Sm domain-containing protein.
    
  0.470
Your Current Organism:
Phialemoniopsis curvata
NCBI taxonomy Id: 1093900
Other names: Bionectriaceae sp. NRRL 46124, CBS 490.82, CDC 45-394-63, P. curvata, Phialemoniopsis curvata (W. Gams & W. B. Cooke) H. Perdomo, D. Garca, Gen, Cano & Guarro 2013, Phialemonium curvatum, Xylariales sp. HP-2011b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.