STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0L32_006263U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (715 aa)    
Predicted Functional Partners:
E0L32_002754
U3 small nucleolar RNA-associated protein 22.
   
 0.995
E0L32_004231
Sas10 domain-containing protein.
   
 0.994
E0L32_004720
Uncharacterized protein.
   
 0.991
E0L32_012093
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
  
 
 0.990
E0L32_000460
Uncharacterized protein.
   
  0.989
E0L32_007318
WD_REPEATS_REGION domain-containing protein.
   
 0.988
E0L32_003662
Uncharacterized protein.
   
 0.988
E0L32_000623
Uncharacterized protein.
   
 0.979
E0L32_001539
RRM domain-containing protein.
   
 
 0.971
E0L32_005386
Brix domain-containing protein.
   
   0.960
Your Current Organism:
Phialemoniopsis curvata
NCBI taxonomy Id: 1093900
Other names: Bionectriaceae sp. NRRL 46124, CBS 490.82, CDC 45-394-63, P. curvata, Phialemoniopsis curvata (W. Gams & W. B. Cooke) H. Perdomo, D. Garca, Gen, Cano & Guarro 2013, Phialemonium curvatum, Xylariales sp. HP-2011b
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