STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0L32_004379WLM domain-containing protein. (424 aa)    
Predicted Functional Partners:
E0L32_004380
DUF4110 domain-containing protein.
 
      0.778
E0L32_003033
Ubiquitin-like domain-containing protein.
    
 
 0.674
E0L32_008180
PLD phosphodiesterase domain-containing protein.
    
 
 0.596
E0L32_011402
Uncharacterized protein.
    
 
 0.596
E0L32_007379
WLM domain-containing protein.
    
 
0.558
E0L32_009635
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...]
    
 
 0.532
E0L32_001049
STAS domain-containing protein.
 
      0.485
E0L32_010929
3'-5' exonuclease domain-containing protein.
    
   0.446
E0L32_011296
Uncharacterized protein.
    
   0.446
E0L32_003207
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
   0.446
Your Current Organism:
Phialemoniopsis curvata
NCBI taxonomy Id: 1093900
Other names: Bionectriaceae sp. NRRL 46124, CBS 490.82, CDC 45-394-63, P. curvata, Phialemoniopsis curvata (W. Gams & W. B. Cooke) H. Perdomo, D. Garca, Gen, Cano & Guarro 2013, Phialemonium curvatum, Xylariales sp. HP-2011b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.