STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0L32_011736Uncharacterized protein. (149 aa)    
Predicted Functional Partners:
E0L32_000016
U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.
   
 0.888
E0L32_007209
Nuclear cap-binding protein subunit 2.
    
 0.876
E0L32_009161
Uncharacterized protein.
    
 0.865
E0L32_007258
RRM domain-containing protein.
    
 0.849
E0L32_011222
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.847
E0L32_003593
Uncharacterized protein.
   
 
 0.844
E0L32_007880
ENDO3c domain-containing protein.
   
 0.826
E0L32_009162
Uncharacterized protein.
    
  0.813
E0L32_000383
Small nuclear ribonucleoprotein G.
    
 0.813
E0L32_007492
PWI domain-containing protein.
    
 
 0.807
Your Current Organism:
Phialemoniopsis curvata
NCBI taxonomy Id: 1093900
Other names: Bionectriaceae sp. NRRL 46124, CBS 490.82, CDC 45-394-63, P. curvata, Phialemoniopsis curvata (W. Gams & W. B. Cooke) H. Perdomo, D. Garca, Gen, Cano & Guarro 2013, Phialemonium curvatum, Xylariales sp. HP-2011b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.