Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| P40_02420 | P40_07095 | RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.782 |
| P40_03810 | P40_07095 | RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.809 |
| P40_03810 | P40_07100 | RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nucleoside transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.583 |
| P40_06660 | P40_07095 | Serine endoprotease DegQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.821 |
| P40_07090 | P40_07095 | RNA polymerase subunit sigma; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.964 |
| P40_07090 | P40_07100 | RNA polymerase subunit sigma; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nucleoside transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.950 |
| P40_07090 | P40_07105 | RNA polymerase subunit sigma; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alginate biosynthesis protein AlgM; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.873 |
| P40_07090 | P40_07110 | RNA polymerase subunit sigma; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.609 |
| P40_07095 | P40_02420 | RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.782 |
| P40_07095 | P40_03810 | RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.809 |
| P40_07095 | P40_06660 | RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine endoprotease DegQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.821 |
| P40_07095 | P40_07090 | RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.964 |
| P40_07095 | P40_07100 | RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nucleoside transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| P40_07095 | P40_07105 | RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alginate biosynthesis protein AlgM; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.922 |
| P40_07095 | P40_07110 | RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.902 |
| P40_07095 | P40_13450 | RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.782 |
| P40_07095 | P40_13765 | RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.793 |
| P40_07095 | P40_16545 | RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.794 |
| P40_07100 | P40_03810 | Nucleoside transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.583 |
| P40_07100 | P40_07090 | Nucleoside transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase subunit sigma; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.950 |
page 1 of 2