STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQS_08225Protein of unknown function. (286 aa)    
Predicted Functional Partners:
KQS_08215
Hypothetical protein.
       0.768
KQS_08220
Hypothetical protein.
       0.768
KQS_08210
Hypothetical protein.
       0.757
KQS_08205
Protein of unknown function.
       0.640
KQS_03425
Protein of unknown function precursor.
  
     0.637
KQS_08140
Protein of unknown function, putative Antirestriction protein.
 
     0.614
KQS_08185
Hypothetical protein.
       0.505
KQS_08190
Protein of unknown function.
       0.505
KQS_08195
Hypothetical protein.
       0.505
KQS_08200
Hypothetical protein.
       0.505
Your Current Organism:
Flavobacterium indicum
NCBI taxonomy Id: 1094466
Other names: F. indicum GPTSA100-9 = DSM 17447, Flavobacterium indicum CIP 109464, Flavobacterium indicum DSM 17447, Flavobacterium indicum DSM 17447 = GPTSA100-9, Flavobacterium indicum GPTSA100-9, Flavobacterium indicum GPTSA100-9 = DSM 17447, Flavobacterium sp. GPTSA100-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.