STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsac_0016KEGG: txy:Thexy_1914 hypothetical protein. (127 aa)    
Predicted Functional Partners:
Tsac_0015
PFAM: Protein of unknown function DUF421; KEGG: txy:Thexy_1913 hypothetical protein.
 
     0.935
Tsac_1361
KEGG: txy:Thexy_0633 hypothetical protein.
  
     0.725
Tsac_0668
KEGG: txy:Thexy_0099 hypothetical protein.
  
     0.645
Tsac_0982
KEGG: txy:Thexy_0304 hypothetical protein.
  
     0.619
Tsac_1525
KEGG: txy:Thexy_1655 hypothetical protein.
  
    0.596
Tsac_2501
ATPase AAA; KEGG: txy:Thexy_0799 ATPase AAA.
 
     0.591
Tsac_2205
KEGG: txy:Thexy_1019 sporulation protein YtxC; TIGRFAM: Sporulation protein YtxC; PFAM: Sporulation protein YtxC.
  
    0.588
Tsac_2153
PFAM: Peptidase M4, propeptide, PepSY; S-layer homology region; KEGG: txy:Thexy_1607 Propeptide PepSY amd peptidase M4.
  
     0.579
Tsac_1427
PFAM: Peptidase M4, propeptide, PepSY; KEGG: txy:Thexy_1820 Propeptide PepSY amd peptidase M4.
  
     0.555
Tsac_0196
PFAM: Sodium/calcium exchanger membrane region; KEGG: txy:Thexy_2070 sodium/calcium exchanger membrane region.
  
    0.518
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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