STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsac_0353KEGG: txy:Thexy_2234 hypothetical protein. (123 aa)    
Predicted Functional Partners:
Tsac_0352
PFAM: Protein of unknown function DUF6, transmembrane; KEGG: txy:Thexy_2233 hypothetical protein.
 
     0.951
Tsac_0351
KEGG: txy:Thexy_2232 oligosaccharyl transferase STT3 subunit.
 
     0.949
Tsac_0354
PFAM: Glycosyl transferase, family 2; KEGG: txy:Thexy_2235 glycosyl transferase family 2.
 
   
 0.943
Tsac_0355
PFAM: GtrA-like protein; KEGG: txy:Thexy_2236 GtrA family protein.
 
   
 0.694
Tsac_0356
PFAM: Glycosyl transferase, family 2; KEGG: txy:Thexy_2237 glycosyl transferase family 2.
 
   
 0.636
Tsac_0357
PFAM: Glycosyl transferase, family 39; KEGG: txy:Thexy_2238 glycosyl transferase family 39.
 
     0.607
Tsac_0358
KEGG: txy:Thexy_2239 hypothetical protein.
 
     0.570
Tsac_0890
PFAM: Protein of unknown function DUF6, transmembrane; KEGG: ckr:CKR_1345 hypothetical protein.
 
     0.512
Tsac_0889
PFAM: Glycosyl transferase, family 2; KEGG: sgy:Sgly_2482 glycosyl transferase family 2.
 
   
 0.487
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.