STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsac_0534KEGG: txy:Thexy_2397 sporulation protein YyaC; TIGRFAM: Protein of unknown function DUF1256; PFAM: Protein of unknown function DUF1256. (184 aa)    
Predicted Functional Partners:
gpr
Germination protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.775
Tsac_1934
KEGG: txy:Thexy_1179 stage III sporulation protein AE; TIGRFAM: Sporulation stage III, protein AE; PFAM: Sporulation stage III, protein AE.
  
     0.764
Tsac_1935
KEGG: txy:Thexy_1178 stage III sporulation protein AD; TIGRFAM: Sporulation stage III, protein AD; PFAM: Sporulation stage III, protein AD.
  
     0.752
Tsac_1937
KEGG: txy:Thexy_1176 stage III sporulation protein AB; TIGRFAM: Sporulation stage III, protein AB; PFAM: Sporulation stage III, protein AB.
  
     0.726
Tsac_1938
KEGG: txy:Thexy_1175 stage III sporulation protein AA; TIGRFAM: Sporulation stage III, protein AA; SMART: ATPase, AAA+ type, core.
  
     0.710
Tsac_1742
KEGG: txy:Thexy_1371 sporulation integral membrane protein YlbJ; TIGRFAM: Sporulation integral membrane protein YlbJ; PFAM: Nucleoside recognition.
  
    0.689
Tsac_0298
TIGRFAM: Sporulation stage III, transcriptional regulator SpoIIID; KEGG: txy:Thexy_2174 sporulation transcriptional regulator SpoIIID.
  
     0.681
Tsac_0932
TIGRFAM: Sporulation stage II, protein E; PFAM: Sporulation stage II, protein E C-terminal; KEGG: txy:Thexy_0254 stage II sporulation protein E, protein serine/threonine phosphatase; SMART: Protein phosphatase 2C-related.
  
     0.671
Tsac_0744
Transcriptional regulator, AbrB family; KEGG: txy:Thexy_0155 stage V sporulation protein T; TIGRFAM: Sporulation stage V, protein T; Transcription regulator AbrB; PFAM: Transcription regulator AbrB/SpoV, predicted.
  
  
 0.669
Tsac_2205
KEGG: txy:Thexy_1019 sporulation protein YtxC; TIGRFAM: Sporulation protein YtxC; PFAM: Sporulation protein YtxC.
  
     0.666
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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