STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsac_0594PFAM: Glycosyl transferase, group 1; KEGG: bse:Bsel_3043 glycosyl transferase group 1 protein. (362 aa)    
Predicted Functional Partners:
Tsac_1145
KEGG: txy:Thexy_0423 polysaccharide pyruvyl transferase CsaB; TIGRFAM: Polysaccharide pyruvyl transferase, CsaB; PFAM: Polysaccharide pyruvyl transferase.
 
  
 0.833
Tsac_0593
PFAM: Glycosyl transferase, family 2; KEGG: spe:Spro_1605 hypothetical protein.
 
  
 0.823
Tsac_2282
KEGG: txy:Thexy_0972 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal.
    
 
 0.671
Tsac_0599
PFAM: NAD-dependent epimerase/dehydratase; KEGG: txy:Thexy_1539 UDP-glucose 4-epimerase.
 
  
 0.539
Tsac_1547
PFAM: Glycosyl transferase, group 1; KEGG: txy:Thexy_1042 glycosyl transferase group 1.
  
     0.492
Tsac_2670
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: txy:Thexy_1880 glutamine--scyllo-inositol transaminase.
 
  
 0.453
Tsac_0597
KEGG: csc:Csac_1093 sugar transferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase.
  
 0.416
Tsac_1355
KEGG: txy:Thexy_0627 alpha-glucan phosphorylase; TIGRFAM: Alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35.
 
 
 0.405
Tsac_0592
PFAM: O-antigen ligase-related; KEGG: nth:Nther_2532 hypothetical protein.
       0.402
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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