Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Tsac_0766 | Tsac_0768 | Tsac_0766 | Tsac_0768 | PFAM: Amino acid permease-associated region; KEGG: txy:Thexy_0172 amino acid permease-associated region. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.401 |
| Tsac_0766 | argR | Tsac_0766 | Tsac_0765 | PFAM: Amino acid permease-associated region; KEGG: txy:Thexy_0172 amino acid permease-associated region. | Arginine repressor, ArgR; Regulates arginine biosynthesis genes. | 0.673 |
| Tsac_0768 | Tsac_0766 | Tsac_0768 | Tsac_0766 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | PFAM: Amino acid permease-associated region; KEGG: txy:Thexy_0172 amino acid permease-associated region. | 0.401 |
| Tsac_0768 | argB | Tsac_0768 | Tsac_0804 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.791 |
| Tsac_0768 | argH | Tsac_0768 | Tsac_0809 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: txy:Thexy_0209 argininosuccinate lyase; PFAM: Fumarate lyase. | 0.876 |
| Tsac_0768 | argJ | Tsac_0768 | Tsac_0803 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | N-acetylglutamate synthase (N-acetylornithine aminotransferase); Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.972 |
| Tsac_0768 | argR | Tsac_0768 | Tsac_0765 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginine repressor, ArgR; Regulates arginine biosynthesis genes. | 0.617 |
| argB | Tsac_0768 | Tsac_0804 | Tsac_0768 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.791 |
| argB | argH | Tsac_0804 | Tsac_0809 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: txy:Thexy_0209 argininosuccinate lyase; PFAM: Fumarate lyase. | 0.983 |
| argB | argJ | Tsac_0804 | Tsac_0803 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | N-acetylglutamate synthase (N-acetylornithine aminotransferase); Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.999 |
| argB | argR | Tsac_0804 | Tsac_0765 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Arginine repressor, ArgR; Regulates arginine biosynthesis genes. | 0.630 |
| argH | Tsac_0768 | Tsac_0809 | Tsac_0768 | TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: txy:Thexy_0209 argininosuccinate lyase; PFAM: Fumarate lyase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.876 |
| argH | argB | Tsac_0809 | Tsac_0804 | TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: txy:Thexy_0209 argininosuccinate lyase; PFAM: Fumarate lyase. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.983 |
| argH | argJ | Tsac_0809 | Tsac_0803 | TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: txy:Thexy_0209 argininosuccinate lyase; PFAM: Fumarate lyase. | N-acetylglutamate synthase (N-acetylornithine aminotransferase); Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.962 |
| argH | argR | Tsac_0809 | Tsac_0765 | TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: txy:Thexy_0209 argininosuccinate lyase; PFAM: Fumarate lyase. | Arginine repressor, ArgR; Regulates arginine biosynthesis genes. | 0.554 |
| argJ | Tsac_0768 | Tsac_0803 | Tsac_0768 | N-acetylglutamate synthase (N-acetylornithine aminotransferase); Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.972 |
| argJ | argB | Tsac_0803 | Tsac_0804 | N-acetylglutamate synthase (N-acetylornithine aminotransferase); Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.999 |
| argJ | argH | Tsac_0803 | Tsac_0809 | N-acetylglutamate synthase (N-acetylornithine aminotransferase); Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: txy:Thexy_0209 argininosuccinate lyase; PFAM: Fumarate lyase. | 0.962 |
| argJ | argR | Tsac_0803 | Tsac_0765 | N-acetylglutamate synthase (N-acetylornithine aminotransferase); Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | Arginine repressor, ArgR; Regulates arginine biosynthesis genes. | 0.642 |
| argR | Tsac_0766 | Tsac_0765 | Tsac_0766 | Arginine repressor, ArgR; Regulates arginine biosynthesis genes. | PFAM: Amino acid permease-associated region; KEGG: txy:Thexy_0172 amino acid permease-associated region. | 0.673 |
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