STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsac_0790KEGG: txy:Thexy_0192 phosphoesterase PA-phosphatase relted protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase. (180 aa)    
Predicted Functional Partners:
Tsac_0085
KEGG: txy:Thexy_1983 phosphoesterase PA-phosphatase relted protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase.
 
  
  0.962
Tsac_1816
Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.919
uppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
  
 
 0.913
Tsac_1995
PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; KEGG: txy:Thexy_1453 Di-trans,poly-cis-decaprenylcistransferase.
  
 
 0.908
mraY
Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
    
 0.905
Tsac_0789
PFAM: Monogalactosyldiacylglycerol synthase; Glycosyl transferase, group 1; KEGG: txy:Thexy_0191 monogalactosyldiacylglycerol synthase.
     
 0.765
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
   0.485
Tsac_1256
PFAM: AMP-dependent synthetase/ligase; KEGG: txy:Thexy_0535 Long-chain-fatty-acid--CoA ligase.
   
 0.454
Tsac_0788
KEGG: txy:Thexy_0189 proton-coupled thiamine transporter YuaJ; TIGRFAM: Thiamine transporter YuaJ; PFAM: Thiamine transporter YuaJ.
       0.428
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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