STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsac_1153PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: txy:Thexy_0433 Rubredoxin-type Fe(Cys)4 protein. (52 aa)    
Predicted Functional Partners:
Tsac_1232
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: txy:Thexy_0511 Ferredoxin--NAD(+) reductase.
  
 
 0.847
Tsac_1487
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: txy:Thexy_1692 Nitrite reductase (NAD(P)H).
  
 
 0.847
Tsac_0810
KEGG: txy:Thexy_0211 CoA-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; Rhodanese-like; SirA-like; Sulphur relay, DsrE-like protein; SMART: Rhodanese-like; Belongs to the sulfur carrier protein TusA family.
  
  
 0.782
Tsac_0814
Desulfoferrodoxin; KEGG: txy:Thexy_0215 desulfoferrodoxin; TIGRFAM: Desulfoferrodoxin; Desulfoferrodoxin Dfx; Desulfoferrodoxin, ferrous iron-binding region; PFAM: Desulfoferrodoxin, ferrous iron-binding region; Desulfoferrodoxin Dfx.
  
  
 0.739
Tsac_0411
KEGG: txy:Thexy_2311 glutaredoxin-like protein, YruB-family; TIGRFAM: Glutaredoxin-like protein, YruB; PFAM: Glutaredoxin.
  
  
 0.635
Tsac_2312
Triosephosphate isomerase; KEGG: elm:ELI_2469 hypothetical protein; TIGRFAM: Triosephosphate isomerase; PFAM: Triosephosphate isomerase.
   
  
 0.606
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
   
  
 0.586
Tsac_1154
KEGG: txy:Thexy_0434 hypothetical protein.
       0.512
Tsac_0046
KEGG: txy:Thexy_1943 pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: Pyruvate-flavodoxin oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding.
  
  
 0.493
Tsac_1486
PFAM: Flavodoxin/nitric oxide synthase; KEGG: txy:Thexy_1693 beta-lactamase.
 
  
 0.489
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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