STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsac_1279EppA_BapA family protein; PFAM: Exported; KEGG: txy:Thexy_0550 LacI family transcriptional regulator. (399 aa)    
Predicted Functional Partners:
Tsac_1280
ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: txy:Thexy_0551 ABC transporter transmembrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.994
Tsac_1281
ABC transporter related protein; KEGG: txy:Thexy_0552 monosaccharide-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 
 0.976
Tsac_1282
ABC-type transporter, integral membrane subunit; PFAM: Bacterial inner-membrane translocator; KEGG: txy:Thexy_0553 ABC transporter transmembrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.962
Tsac_0140
KEGG: txy:Thexy_2027 LacI family transcriptional regulator.
     
  0.900
Tsac_0359
KEGG: txy:Thexy_2241 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region.
    
 
 0.592
Tsac_0518
KEGG: txy:Thexy_2381 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain.
    
 
 0.592
Tsac_1378
KEGG: dhd:Dhaf_1741 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region.
    
 
 0.592
Tsac_1636
KEGG: txy:Thexy_1129 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain.
    
 
 0.592
Tsac_2129
KEGG: txy:Thexy_1583 histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like.
    
 
 0.592
Tsac_1286
KEGG: txy:Thexy_0557 L-fucose isomerase-like protein protein.
 
     0.562
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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