STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsac_1394PFAM: Xylose isomerase, TIM barrel domain; KEGG: txy:Thexy_1845 xylose isomerase. (265 aa)    
Predicted Functional Partners:
pgi
KEGG: txy:Thexy_1846 glucose-6-phosphate isomerase; HAMAP: Phosphoglucose isomerase (PGI); PFAM: Phosphoglucose isomerase (PGI); Belongs to the GPI family.
 
     0.611
Tsac_0267
PfkB domain protein; PFAM: Carbohydrate/purine kinase; KEGG: txy:Thexy_2142 2-dehydro-3-deoxygluconokinase.
  
  
 0.453
Tsac_1392
PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: txy:Thexy_1847 HD domain-containing protein.
       0.414
Tsac_0556
KEGG: txy:Thexy_0005 hypothetical protein.
  
     0.411
Tsac_0498
Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: mas:Mahau_1490 oxidoreductase domain-containing protein.
  
  
 0.401
Tsac_1155
Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: txy:Thexy_0435 oxidoreductase.
  
  
 0.401
Tsac_1258
Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: txy:Thexy_0538 oxidoreductase.
  
  
 0.401
Tsac_1261
Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: txy:Thexy_0541 oxidoreductase.
  
  
 0.401
Tsac_1449
Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: txy:Thexy_1740 oxidoreductase.
  
  
 0.401
Tsac_1450
Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: txy:Thexy_1739 oxidoreductase.
  
  
 0.401
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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