STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsac_1428PFAM: Protein of unknown function DUF6, transmembrane; KEGG: txy:Thexy_1819 hypothetical protein. (288 aa)    
Predicted Functional Partners:
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
    0.767
Tsac_1430
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: txy:Thexy_1817 ABC transporter transmembrane protein.
       0.512
Tsac_1431
KEGG: txy:Thexy_1816 taurine ABC transporter ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
  
    0.512
Tsac_2608
PFAM: Protein of unknown function DUF554; KEGG: txy:Thexy_0680 hypothetical protein.
 
     0.409
Tsac_0502
KEGG: cle:Clole_1227 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain.
  
  
 0.408
Tsac_0938
KEGG: txy:Thexy_0260 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; AraC protein, arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain.
  
  
 0.408
Tsac_1432
KEGG: txy:Thexy_1815 NMT1/THI5 like domain protein.
       0.407
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.