STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsac_1447PFAM: Bacterial extracellular solute-binding, family 1; KEGG: txy:Thexy_1742 extracellular solute-binding protein family 1. (555 aa)    
Predicted Functional Partners:
Tsac_1446
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: txy:Thexy_1744 ABC transporter transmembrane protein.
 
  0.981
Tsac_1445
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: txy:Thexy_1745 ABC transporter transmembrane protein.
 
 
 0.976
Tsac_1458
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: txy:Thexy_1731 ABC transporter transmembrane protein.
  
  0.958
Tsac_1271
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: cpy:Cphy_1547 binding-protein-dependent transport systems inner membrane component.
 
 
 0.956
Tsac_1457
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: txy:Thexy_1732 ABC transporter transmembrane protein.
 
 
 0.956
Tsac_1272
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: cpy:Cphy_1548 binding-protein-dependent transport systems inner membrane component.
  
  0.952
Tsac_1456
PFAM: Bacterial extracellular solute-binding, family 1; KEGG: txy:Thexy_1733 extracellular solute-binding protein family 1.
  
  
 
0.929
Tsac_1273
KEGG: cpy:Cphy_1549 hypothetical protein.
  
  
 
0.926
Tsac_1448
PFAM: Glycosyl hydrolase 67 middle; Glycoside hydrolase family 67; Glycosyl hydrolase 67, C-terminal; KEGG: txy:Thexy_1741 alpha-glucuronidase.
 
     0.828
xynB
PFAM: Glycoside hydrolase, family 39; KEGG: txy:Thexy_1737 Xylan 1,4-beta-xylosidase.
 
     0.813
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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